Koalas nearly went extinct before humans arrived, DNA study reveals

by | Jul 19, 2026 | Science

News summary produced by Claude AI

A major genetic analysis conducted by researchers at the University of Sydney and Texas A&M University has provided new insights into koala evolutionary history, indicating that the species experienced a significant population collapse around 100,000 years ago. This decline occurred during the late Pleistocene glacial period, long before humans reached Australia approximately 65,000 years ago, challenging previous scientific assumptions about the timing of koala population decline.

The research team, led by PhD student Toby Kovacs, calculated the mutation rate of koalas by sequencing genomes from parent-offspring groups and analyzing how new genetic changes accumulate across generations. The koala mutation rate proved to be approximately half that of humans. Researchers then applied this rate to 457 koala genomes to reconstruct population dynamics spanning thousands of years. This represents the first direct mutation rate estimate for koalas and other members of the marsupial order Diprotodontia, which includes wombats, kangaroos and possums.

The analysis revealed that koala populations reached a critical genetic bottleneck nearly 60,000 years ago during a period of major environmental disruption. The expanding Nullarbor Plain around 70,000 years ago created semi-arid shrubland that reduced suitable habitat and separated eastern and western populations. The western group eventually disappeared while the eastern population survived the most severe glacial conditions. When climate conditions improved during the current interglacial period, the surviving eastern population expanded and divided into five genetically distinct groups between 16,500 and 6,000 years ago, eventually giving rise to current east coast populations.

Modern koalas now face different threats, including hunting, habitat destruction, bushfires, and disease. Recent genetic data indicate that Queensland and New South Wales populations continue declining, while Victorian populations appear to be recovering. Since 2022, koalas have been officially listed as endangered in Queensland, New South Wales, and the Australian Capital Territory. The newly calculated mutation rate enables scientists to better understand recent population changes and develop improved conservation strategies. Researchers suggest that understanding whether populations are shrinking allows conservationists to intervene before populations lose genetic diversity and face increased inbreeding risks.

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